Browse predicted human virus miRNA targets Browse predited mouse virus miRNA targets Browse predited rat virus miRNA targets Browse predited chicken virus miRNA targets
virusRotavirus C
accNC_007546        get sequence
locusNC_007546 2736 bp ds-RNA linear VRL 09-NOV-2005
descriptionRotavirus C segment 2, complete sequence.
versionNC_007546.1 GI:80984706
organismRotavirus C
 
feature0
  * location : NC_007546
  * mol_type : 1..2736
  * strain : Rotavirus C
  * db_xref : genomic RNA
      
similarity between familyBrowse similarity between other speices in the same family.
infected tissueintestine



Targeted by miRanda

(show 100 here)
Total 32 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-miR-103 hsa-miR-107 hsa-miR-122a hsa-miR-15a hsa-miR-15b
hsa-miR-16 hsa-miR-17-3p hsa-miR-191* hsa-miR-195 hsa-miR-217
hsa-miR-320 hsa-miR-324-3p hsa-miR-338 hsa-miR-367 hsa-miR-370
hsa-miR-371 hsa-miR-412 hsa-miR-424 hsa-miR-431 hsa-miR-453
hsa-miR-485-5p hsa-miR-486 hsa-miR-497 hsa-miR-503 hsa-miR-504
hsa-miR-514 hsa-miR-516-5p hsa-miR-517a hsa-miR-517b hsa-miR-518a
hsa-miR-542-3p hsa-miR-98
Targeted by TargetScanBrowse



view map
cds
positiongeneprotein_idnote
reference
1
Author : Chen,Z., Lambden,P.R., Lau,J., Caul,E.O. and Clarke,I.N.
Title : Human group C rotavirus: completion of the genome sequence and gene coding assignments of a non-cultivatable rotavirus
Journal : Virus Res. 83 (1-2), 179-187 (2002)
Comment : X
2 (bases 1 to 2736)
Author : .
Title : Direct Submission Information, NIH, Bethesda, MD 20894, USA
Journal : Submitted (02-NOV-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Comment : X
3 (bases 1 to 2736)
Author : Clarke,I.N.
Title : Direct Submission University of Southampton, Mailpoint 814, Level C, South Block,
Journal : Submitted (02-JAN-2001) Clarke I.N., Molecular Microbiology, University of Southampton, Mailpoint 814, Level C, South Block,
Comment : X
1
Author : Chen,Z., Lambden,P.R., Lau,J., Caul,E.O. and Clarke,I.N.
Title : Human group C rotavirus: completion of the genome sequence and gene coding assignments of a non-cultivatable rotavirus
Journal : Virus Res. 83 (1-2), 179-187 (2002)
Comment : X
2 (bases 1 to 2736)
Author : .
Title : Direct Submission Information, NIH, Bethesda, MD 20894, USA
Journal : Submitted (02-NOV-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Comment : X
3 (bases 1 to 2736)
Author : Clarke,I.N.
Title : Direct Submission University of Southampton, Mailpoint 814, Level C, South Block,
Journal : Submitted (02-JAN-2001) Clarke I.N., Molecular Microbiology, University of Southampton, Mailpoint 814, Level C, South Block,
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw