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virusMammalian orthoreovirus 1
accNC_004259        get sequence
locusNC_004259 3915 bp ds-RNA linear VRL 20-OCT-2005
descriptionMammalian orthoreovirus 1 segment L2, complete sequence.
versionNC_004259.1 GI:23307872
organismMammalian orthoreovirus 1
 
feature0
  * location : NC_004259
  * mol_type : 1..3915
  * strain : Mammalian orthoreovirus 1
  * db_xref : genomic RNA
    
similarity between familyBrowse similarity between other speices in the same family.
infected tissueunknown



Targeted by miRanda

(show 100 here)
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Total 110 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-let-7a hsa-let-7c hsa-let-7d hsa-miR-103 hsa-miR-106a
hsa-miR-106b hsa-miR-107 hsa-miR-10a hsa-miR-125a hsa-miR-125b
hsa-miR-126 hsa-miR-127 hsa-miR-134 hsa-miR-136 hsa-miR-141
hsa-miR-147 hsa-miR-149 hsa-miR-150 hsa-miR-153 hsa-miR-154*
hsa-miR-15a hsa-miR-15b hsa-miR-16 hsa-miR-17-3p hsa-miR-17-5p
hsa-miR-181a hsa-miR-181b hsa-miR-181d hsa-miR-188 hsa-miR-189
hsa-miR-18a* hsa-miR-191* hsa-miR-192 hsa-miR-193b hsa-miR-195
hsa-miR-196b hsa-miR-197 hsa-miR-199a hsa-miR-199b hsa-miR-200a*
hsa-miR-205 hsa-miR-210 hsa-miR-213 hsa-miR-214 hsa-miR-22
hsa-miR-220 hsa-miR-222 hsa-miR-224 hsa-miR-24 hsa-miR-29a
hsa-miR-29b hsa-miR-302a* hsa-miR-324-3p hsa-miR-324-5p hsa-miR-328
hsa-miR-331 hsa-miR-337 hsa-miR-338 hsa-miR-339 hsa-miR-340
hsa-miR-342 hsa-miR-34a hsa-miR-34b hsa-miR-34c hsa-miR-363*
hsa-miR-367 hsa-miR-369-5p hsa-miR-370 hsa-miR-375 hsa-miR-412
hsa-miR-423 hsa-miR-425 hsa-miR-433 hsa-miR-449 hsa-miR-452*
hsa-miR-455 hsa-miR-483 hsa-miR-485-3p hsa-miR-485-5p hsa-miR-486
hsa-miR-490 hsa-miR-491 hsa-miR-492 hsa-miR-493-3p hsa-miR-497
hsa-miR-498 hsa-miR-500 hsa-miR-502 hsa-miR-503 hsa-miR-504
hsa-miR-506 hsa-miR-509 hsa-miR-510 hsa-miR-512-3p hsa-miR-515-3p
hsa-miR-516-3p hsa-miR-517* hsa-miR-517a hsa-miR-517b hsa-miR-520e
Targeted by TargetScanBrowse



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cds
positiongeneprotein_idnote
reference
1 (bases 1 to 3915)
Author : Breun,L.A., Broering,T.J., McCutcheon,A.M., Harrison,S.J.,
Title : Mammalian reovirus L2 gene and lambda2 core spike protein sequences and whole-genome comparisons of reoviruses type 1 Lang, type 2
Journal : Virology 287 (2), 333-348 (2001)
Comment : X
2 (bases 1 to 3915)
Author : .
Title : Direct Submission Information, NIH, Bethesda, MD 20894, USA
Journal : Submitted (25-SEP-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Comment : X
3 (bases 1 to 3915)
Author : Breun,L.A., Broering,T.J., McCutcheon,A.M., Harrison,S.J.,
Title : Direct Submission Genetics, Harvard Medical School, 200 Longwood Avenue, Boston, MA
Journal : Submitted (08-MAY-2001) Department of Microbiology and Molecular Genetics, Harvard Medical School, 200 Longwood Avenue, Boston, MA
Comment : X
1 (bases 1 to 3915)
Author : Breun,L.A., Broering,T.J., McCutcheon,A.M., Harrison,S.J.,
Title : Mammalian reovirus L2 gene and lambda2 core spike protein sequences and whole-genome comparisons of reoviruses type 1 Lang, type 2
Journal : Virology 287 (2), 333-348 (2001)
Comment : X
2 (bases 1 to 3915)
Author : .
Title : Direct Submission Information, NIH, Bethesda, MD 20894, USA
Journal : Submitted (25-SEP-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Comment : X
3 (bases 1 to 3915)
Author : Breun,L.A., Broering,T.J., McCutcheon,A.M., Harrison,S.J.,
Title : Direct Submission Genetics, Harvard Medical School, 200 Longwood Avenue, Boston, MA
Journal : Submitted (08-MAY-2001) Department of Microbiology and Molecular Genetics, Harvard Medical School, 200 Longwood Avenue, Boston, MA
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw