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virusColorado tick fever virus
accNC_004187        get sequence
locusNC_004187 2133 bp ds-RNA linear VRL 12-JAN-2004
descriptionColorado tick fever virus segment 7, complete sequence.
versionNC_004187.1 GI:22960712
organismColorado tick fever virus
 
feature0
  * location : NC_004187
  * mol_type : 1..2133
  * strain : Colorado tick fever virus
  * db_xref : genomic RNA
    
similarity between familyBrowse similarity between other speices in the same family.
infected tissuebrain



Targeted by miRanda

(show 100 here)
Total 67 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-let-7b hsa-let-7c hsa-miR-103 hsa-miR-124a hsa-miR-125a
hsa-miR-125b hsa-miR-130b hsa-miR-148b hsa-miR-149 hsa-miR-150
hsa-miR-152 hsa-miR-16 hsa-miR-181a hsa-miR-181b hsa-miR-181d
hsa-miR-182 hsa-miR-183 hsa-miR-187 hsa-miR-18a hsa-miR-191*
hsa-miR-193a hsa-miR-193b hsa-miR-212 hsa-miR-22 hsa-miR-24
hsa-miR-324-3p hsa-miR-324-5p hsa-miR-326 hsa-miR-331 hsa-miR-337
hsa-miR-339 hsa-miR-340 hsa-miR-342 hsa-miR-345 hsa-miR-346
hsa-miR-34b hsa-miR-34c hsa-miR-363 hsa-miR-363* hsa-miR-375
hsa-miR-378 hsa-miR-382 hsa-miR-412 hsa-miR-423 hsa-miR-425
hsa-miR-449 hsa-miR-484 hsa-miR-485-3p hsa-miR-485-5p hsa-miR-486
hsa-miR-502 hsa-miR-510 hsa-miR-515-3p hsa-miR-517* hsa-miR-518c*
hsa-miR-518e hsa-miR-518f* hsa-miR-519a hsa-miR-519b hsa-miR-519c
hsa-miR-519e hsa-miR-523 hsa-miR-524 hsa-miR-525* hsa-miR-526a
hsa-miR-526c hsa-miR-96
Targeted by TargetScanBrowse



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cds
positiongeneprotein_idnote
reference
1 (bases 1 to 2133)
Author : Attoui,H., Billoir,F., Biagini,P., Cantaloube,J.F., de Chesse,R.,
Title : Sequence determination and analysis of the full-length genome of colorado tick fever virus, the type species of genus Coltivirus
Journal : Biochem. Biophys. Res. Commun. 273 (3), 1121-1125 (2000)
Comment : X
2 (bases 1 to 2133)
Author : Attoui,H., Billoir,F., Gallian,P., De Micco,P. and de
Title : Direct Submission Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
Journal : Lamballerie,X.Submitted (31-MAR-1999) Virologie Tropicale et Transfusionnelle, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
Comment : X
1 (bases 1 to 2133)
Author : Attoui,H., Billoir,F., Biagini,P., Cantaloube,J.F., de Chesse,R.,
Title : Sequence determination and analysis of the full-length genome of colorado tick fever virus, the type species of genus Coltivirus
Journal : Biochem. Biophys. Res. Commun. 273 (3), 1121-1125 (2000)
Comment : X
2 (bases 1 to 2133)
Author : Attoui,H., Billoir,F., Gallian,P., De Micco,P. and de
Title : Direct Submission Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
Journal : Lamballerie,X.Submitted (31-MAR-1999) Virologie Tropicale et Transfusionnelle, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw