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virusColorado tick fever virus
accNC_004183        get sequence
locusNC_004183 3586 bp ds-RNA linear VRL 12-JAN-2004
descriptionColorado tick fever virus segment 3, complete sequence.
versionNC_004183.1 GI:22960704
organismColorado tick fever virus
 
feature0
  * location : NC_004183
  * mol_type : 1..3586
  * strain : Colorado tick fever virus
  * db_xref : genomic RNA
    
similarity between familyBrowse similarity between other speices in the same family.
infected tissuebrain



Targeted by miRanda

(show 100 here)
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Total 101 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-let-7a hsa-let-7c hsa-let-7d hsa-let-7g hsa-let-7i
hsa-miR-103 hsa-miR-125a hsa-miR-125b hsa-miR-127 hsa-miR-133a
hsa-miR-133b hsa-miR-142-3p hsa-miR-145 hsa-miR-149 hsa-miR-150
hsa-miR-152 hsa-miR-15a hsa-miR-15b hsa-miR-187 hsa-miR-188
hsa-miR-18a* hsa-miR-191* hsa-miR-193b hsa-miR-196a hsa-miR-196b
hsa-miR-197 hsa-miR-200a hsa-miR-200b hsa-miR-203 hsa-miR-205
hsa-miR-210 hsa-miR-211 hsa-miR-214 hsa-miR-217 hsa-miR-22
hsa-miR-220 hsa-miR-221 hsa-miR-222 hsa-miR-223 hsa-miR-25
hsa-miR-26a hsa-miR-26b hsa-miR-296 hsa-miR-299-3p hsa-miR-29a
hsa-miR-29b hsa-miR-29c hsa-miR-302a hsa-miR-31 hsa-miR-324-3p
hsa-miR-324-5p hsa-miR-326 hsa-miR-328 hsa-miR-329 hsa-miR-331
hsa-miR-335 hsa-miR-337 hsa-miR-338 hsa-miR-339 hsa-miR-340
hsa-miR-342 hsa-miR-346 hsa-miR-363* hsa-miR-369-5p hsa-miR-370
hsa-miR-371 hsa-miR-373* hsa-miR-375 hsa-miR-380-5p hsa-miR-412
hsa-miR-423 hsa-miR-424 hsa-miR-425 hsa-miR-431 hsa-miR-432
hsa-miR-455 hsa-miR-483 hsa-miR-484 hsa-miR-485-3p hsa-miR-486
hsa-miR-487a hsa-miR-488 hsa-miR-490 hsa-miR-492 hsa-miR-494
hsa-miR-500 hsa-miR-504 hsa-miR-506 hsa-miR-509 hsa-miR-510
hsa-miR-514 hsa-miR-516-3p hsa-miR-517b hsa-miR-519d hsa-miR-519e
hsa-miR-520d hsa-miR-523 hsa-miR-525 hsa-miR-92 hsa-miR-96
Targeted by TargetScanBrowse



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cds
positiongeneprotein_idnote
reference
1 (bases 1 to 3586)
Author : Attoui,H., Billoir,F., Biagini,P., Cantaloube,J.F., de Chesse,R.,
Title : Sequence determination and analysis of the full-length genome of colorado tick fever virus, the type species of genus Coltivirus
Journal : Biochem. Biophys. Res. Commun. 273 (3), 1121-1125 (2000)
Comment : X
2 (bases 1 to 3586)
Author : Attoui,H., Billoir,F., Gallian,P., De Micco,P. and de
Title : Direct Submission Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
Journal : Lamballerie,X.Submitted (31-MAR-1999) Virologie Tropicale et Transfusionnelle, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
Comment : X
1 (bases 1 to 3586)
Author : Attoui,H., Billoir,F., Biagini,P., Cantaloube,J.F., de Chesse,R.,
Title : Sequence determination and analysis of the full-length genome of colorado tick fever virus, the type species of genus Coltivirus
Journal : Biochem. Biophys. Res. Commun. 273 (3), 1121-1125 (2000)
Comment : X
2 (bases 1 to 3586)
Author : Attoui,H., Billoir,F., Gallian,P., De Micco,P. and de
Title : Direct Submission Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
Journal : Lamballerie,X.Submitted (31-MAR-1999) Virologie Tropicale et Transfusionnelle, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw