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virusRotavirus C
accM81488        get sequence
locusROTNONSTPR 730 bp ss-RNA linear VRL 15-DEC-2000
descriptionRotavirus nonstructural protein RNA, complete cds.
versionM81488.2 GI:11863135
organismRotavirus C
 
feature
  * location : M81488
  * mol_type : 1..730
  * strain : Rotavirus C
  * db_xref : genomic RNA
      
similarity between familyBrowse similarity between other speices in the same family.
infected tissueintestine



Targeted by miRanda

(show 100 here)
Total 36 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-let-7a hsa-let-7b hsa-let-7c hsa-let-7d hsa-let-7f
hsa-let-7g hsa-let-7i hsa-miR-103 hsa-miR-107 hsa-miR-127
hsa-miR-134 hsa-miR-189 hsa-miR-205 hsa-miR-210 hsa-miR-217
hsa-miR-296 hsa-miR-302a hsa-miR-302b hsa-miR-302c hsa-miR-302d
hsa-miR-30a-3p hsa-miR-30e-3p hsa-miR-346 hsa-miR-34c hsa-miR-370
hsa-miR-373* hsa-miR-432* hsa-miR-485-5p hsa-miR-486 hsa-miR-491
hsa-miR-498 hsa-miR-512-5p hsa-miR-526b hsa-miR-542-5p hsa-miR-545
hsa-miR-98
Targeted by TargetScanBrowse



view map
cds
positiongeneprotein_idnote
XNS26AAA47354.1X
reference
1 (bases 1 to 730)
Author : Lambden,P.R., Cooke,S.J., Caul,E.O. and Clarke,I.N.
Title : Cloning of noncultivatable human rotavirus by single primer amplification
Journal : J. Virol. 66 (3), 1817-1822 (1992) PUBMED 1371174
Comment : X
2 (bases 1 to 730)
Author : Lambden,P.R., Cooke,S.J., Caul,E.O. and Clarke,I.N.
Title : Direct Submission
Journal : Submitted (17-JUL-1992) Molecular Microbiology, Southampton General Hospital, Mailpoint 814, Level C, South Block, Southampton SO16 6YD, UK
Comment : X
3 (bases 1 to 730)
Author : Lambden,P.R., Cooke,S.J., Caul,E.O. and Clarke,I.N.
Title : Direct Submission
Journal : Submitted (15-DEC-2000) Molecular Microbiology, Southampton General Hospital, Mailpoint 814, Level C, South Block, Southampton SO16 6YD, UK REMARK Sequence update by submitter
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw