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virusHuman T-lymphotropic virus 2
accM10060        get sequence
locusHL2V2CG 8952 bp DNA linear VRL 29-AUG-2002
descriptionHuman T-lymphotropic virus 2, complete proviral genome.
versionM10060.1 GI:329559
organismHuman T-lymphotropic virus 2
 
feature
  * location : M10060
  * mol_type : 1..8952
  * strain : Human T-lymphotropic virus 2
  * db_xref : genomic DNA
    
similarity between familyBrowse similarity between other speices in the same family.
infected tissuelung kidney intestine



Targeted by miRanda

(show 100 here)
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Total 128 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-let-7a hsa-let-7b hsa-let-7c hsa-let-7d hsa-let-7e
hsa-let-7f hsa-let-7g hsa-let-7i hsa-miR-103 hsa-miR-107
hsa-miR-122a hsa-miR-124a hsa-miR-125a hsa-miR-125b hsa-miR-126
hsa-miR-127 hsa-miR-133a hsa-miR-133b hsa-miR-134 hsa-miR-135a
hsa-miR-135b hsa-miR-138 hsa-miR-140 hsa-miR-145 hsa-miR-147
hsa-miR-149 hsa-miR-155 hsa-miR-15b hsa-miR-16 hsa-miR-17-3p
hsa-miR-182* hsa-miR-184 hsa-miR-185 hsa-miR-188 hsa-miR-189
hsa-miR-18a hsa-miR-18a* hsa-miR-18b hsa-miR-191* hsa-miR-193a
hsa-miR-193b hsa-miR-198 hsa-miR-199a hsa-miR-199b hsa-miR-202
hsa-miR-206 hsa-miR-210 hsa-miR-214 hsa-miR-22 hsa-miR-221
hsa-miR-24 hsa-miR-25 hsa-miR-28 hsa-miR-296 hsa-miR-299-3p
hsa-miR-302a hsa-miR-31 hsa-miR-320 hsa-miR-324-3p hsa-miR-324-5p
hsa-miR-325 hsa-miR-326 hsa-miR-328 hsa-miR-331 hsa-miR-335
hsa-miR-337 hsa-miR-339 hsa-miR-340 hsa-miR-345 hsa-miR-346
hsa-miR-34a hsa-miR-34b hsa-miR-34c hsa-miR-362 hsa-miR-363*
hsa-miR-370 hsa-miR-371 hsa-miR-378 hsa-miR-380-5p hsa-miR-383
hsa-miR-412 hsa-miR-423 hsa-miR-425 hsa-miR-431 hsa-miR-432
hsa-miR-432* hsa-miR-449 hsa-miR-450 hsa-miR-453 hsa-miR-484
hsa-miR-485-5p hsa-miR-486 hsa-miR-490 hsa-miR-491 hsa-miR-492
hsa-miR-493-3p hsa-miR-497 hsa-miR-498 hsa-miR-500 hsa-miR-502
Targeted by TargetScanBrowse



view map
cds
positiongeneprotein_idnote
XXAAB59884.1gag polyprotein
reference
1 (bases 1 to 763)
Author : Shimotohno,K., Golde,D.W., Miwa,M., Sugimura,T. and Chen,I.S.
Title : Nucleotide sequence analysis of the long terminal repeat of human T-cell leukemia virus type II
Journal : Proc. Natl. Acad. Sci. U.S.A. 81 (4), 1079-1083 (1984) PUBMED 6322188
Comment : X
2 (bases 5180 to 6644)
Author : Sodroski,J., Patarca,R., Perkins,D., Briggs,D., Lee,T.H., Essex,M., Coligan,J., Wong-Staal,F., Gallo,R.C. and Haseltine,W.A.
Title : Sequence of the envelope glycoprotein gene of type II human T lymphotropic virus
Journal : Science 225 (4660), 421-424 (1984) PUBMED 6204380
Comment : X
3 (sites)
Author : Weiss,R.L., Teich,N., Varmus,H. and Coffin,J.
Title : RNA Tumor Viruses
Journal : (in) Weiss,R.L., Teich,N., Varmus,H. and Coffin,J. (Eds.); RNA TUMOR VIRUSES, SECOND EDITION, 2, Vol. 2: 1070-1085; Cold Spring Harbor Laboratory, Cold Spring Harbor (1985)
Comment : X
4 (bases 1 to 8952)
Author : Shimotohno,K., Takahashi,Y., Shimizu,N., Gojobori,T., Golde,D.W., Chen,I.S., Miwa,M. and Sugimura,T.
Title : Complete nucleotide sequence of an infectious clone of human T-cell leukemia virus type II: an open reading frame for the protease gene
Journal : Proc. Natl. Acad. Sci. U.S.A. 82 (10), 3101-3105 (1985) PUBMED 2582407
Comment : X
5 (sites)
Author : Rosenblatt,J.
Title : Characterization of adenovirus type 40 E1 region
Journal : Unpublished
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw