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virusRotavirus subgroup 1
accK02028        get sequence
locusRO1VP7 1062 bp ds-RNA linear VRL 03-AUG-1993
descriptionSimian 11 rotavirus major outer capsid protein VP7 (seg 9), cDNA.
versionK02028.1 GI:333791
organismRotavirus subgroup 1
 
feature
  * location : K02028
  * mol_type : 1..1062
  * strain : Rotavirus subgroup 1
  * db_xref : genomic RNA
      
similarity between familyBrowse similarity between other speices in the same family.
infected tissueintestine



Targeted by miRanda

(show 100 here)
Total 36 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-miR-103 hsa-miR-106a hsa-miR-106b hsa-miR-107 hsa-miR-133a
hsa-miR-133b hsa-miR-145 hsa-miR-149 hsa-miR-154* hsa-miR-16
hsa-miR-17-3p hsa-miR-17-5p hsa-miR-189 hsa-miR-213 hsa-miR-217
hsa-miR-221 hsa-miR-30a-3p hsa-miR-30e-3p hsa-miR-320 hsa-miR-337
hsa-miR-34a hsa-miR-34b hsa-miR-34c hsa-miR-367 hsa-miR-371
hsa-miR-372 hsa-miR-379 hsa-miR-383 hsa-miR-432 hsa-miR-433
hsa-miR-449 hsa-miR-485-5p hsa-miR-492 hsa-miR-493-5p hsa-miR-512-3p
hsa-miR-542-5p
Targeted by TargetScanBrowse



view map
cds
positiongeneprotein_idnote
XXAAA47307.1major outer capsid protein VP7 (see comment)
reference
1 (bases 1 to 1062)
Author : Arias,C.F., Lopez,S., Bell,J.R. and Strauss,J.H.
Title : Primary structure of the neutralization antigen of simian rotavirus SA11 as deduced from cDNA sequence
Journal : J. Virol. 50 (2), 657-661 (1984) PUBMED 6323768
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw