Browse predicted human virus miRNA targets Browse predited mouse virus miRNA targets Browse predited rat virus miRNA targets Browse predited chicken virus miRNA targets
virusBanna virus
accAF052015        get sequence
locusAF052015 977 bp RNA linear VRL 19-SEP-2002
descriptionBanna virus JKT-6423 segment 10 Vp10 gene, complete cds.
versionAF052015.1 GI:3850232
organismBanna virus
 
feature
  * location : AF052015
  * mol_type : 1..977
  * strain : Banna virus
  * db_xref : genomic RNA
    
similarity between familyBrowse similarity between other speices in the same family.
infected tissueunknown



Targeted by miRanda

(show 100 here)
Total 50 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-miR-126 hsa-miR-127 hsa-miR-138 hsa-miR-141 hsa-miR-145
hsa-miR-147 hsa-miR-148b hsa-miR-16 hsa-miR-183 hsa-miR-185
hsa-miR-197 hsa-miR-199a hsa-miR-199b hsa-miR-200a hsa-miR-21
hsa-miR-296 hsa-miR-302b hsa-miR-326 hsa-miR-331 hsa-miR-340
hsa-miR-34a hsa-miR-34c hsa-miR-363* hsa-miR-370 hsa-miR-375
hsa-miR-380-5p hsa-miR-382 hsa-miR-423 hsa-miR-449 hsa-miR-486
hsa-miR-498 hsa-miR-503 hsa-miR-509 hsa-miR-515-5p hsa-miR-516-3p
hsa-miR-518c* hsa-miR-518e hsa-miR-518f hsa-miR-519e* hsa-miR-520a
hsa-miR-520b hsa-miR-520c hsa-miR-520d hsa-miR-520e hsa-miR-520f
hsa-miR-526b hsa-miR-526b* hsa-miR-526c hsa-miR-542-3p hsa-miR-545
Targeted by TargetScanBrowse



view map
cds
positiongeneprotein_idnote
XXAAC72042.1X
reference
1 (bases 1 to 977)
Author : Attoui,H., Charrel,R.N., Billoir,F., Cantaloube,J.F., de Micco,P. and de Lamballerie,X.
Title : Comparative sequence analysis of American, European and Asian isolates of viruses in the genus Coltivirus
Journal : J. Gen. Virol. 79 (Pt 10), 2481-2489 (1998) PUBMED 9780055
Comment : X
2 (bases 1 to 977)
Author : Attoui,H., de Lamballerie,X. and De Micco,P.
Title : Direct Submission
Journal : Submitted (04-MAR-1998) Virologie, Faculte de Medecine de Marseille, 27-boulevard Jean Moulin, Marseille 13005, France
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw