Browse predicted human virus miRNA targets Browse predited mouse virus miRNA targets Browse predited rat virus miRNA targets Browse predited chicken virus miRNA targets
virusColorado tick fever virus
accAF007172        get sequence
locusAF007172 664 bp RNA linear VRL 29-DEC-1999
descriptionColorado tick fever virus M6 segment, partial sequence.
versionAF007172.2 GI:6646677
organismColorado tick fever virus
 
feature
  * location : AF007172
  * mol_type : 1..664
  * strain : Colorado tick fever virus
  * db_xref : genomic RNA
    
similarity between familyBrowse similarity between other speices in the same family.
infected tissueunknown



Targeted by miRanda

(show 100 here)
Total 57 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-let-7a hsa-let-7b hsa-let-7c hsa-let-7d hsa-let-7e
hsa-let-7f hsa-let-7g hsa-let-7i hsa-miR-106a hsa-miR-106b
hsa-miR-132 hsa-miR-143 hsa-miR-144 hsa-miR-150 hsa-miR-15a
hsa-miR-15b hsa-miR-17-5p hsa-miR-182* hsa-miR-185 hsa-miR-18a
hsa-miR-199a hsa-miR-20a hsa-miR-20b hsa-miR-210 hsa-miR-212
hsa-miR-217 hsa-miR-302a hsa-miR-302c hsa-miR-340 hsa-miR-345
hsa-miR-362 hsa-miR-363* hsa-miR-369-5p hsa-miR-372 hsa-miR-373
hsa-miR-375 hsa-miR-424 hsa-miR-452* hsa-miR-453 hsa-miR-485-5p
hsa-miR-493-3p hsa-miR-497 hsa-miR-503 hsa-miR-510 hsa-miR-516-5p
hsa-miR-517* hsa-miR-518a hsa-miR-518c* hsa-miR-520a hsa-miR-520a*
hsa-miR-520d hsa-miR-520e hsa-miR-524 hsa-miR-526b hsa-miR-526c
hsa-miR-93 hsa-miR-98
Targeted by TargetScanBrowse



view map
cds
positiongeneprotein_idnote
reference
1 (bases 1 to 664)
Author : Attoui,H., Charrel,R.N., Billoir,F., Cantaloube,J.F., de Micco,P. and de Lamballerie,X.
Title : Comparative sequence analysis of American, European and Asian isolates of viruses in the genus Coltivirus
Journal : J. Gen. Virol. 79 (Pt 10), 2481-2489 (1998) PUBMED 9780055
Comment : X
2 (bases 1 to 664)
Author : Attoui,H., de Lamballerie,X., Charrel,R.N., Cantaloube,J.F. and De Mico,P.
Title : Direct Submission
Journal : Submitted (06-JUN-1997) Virology, Faculte de Medecine, Bd. Jean Moulin, Marseille 13385 cedex 5, France
Comment : X
3 (bases 1 to 664)
Author : Attoui,H., de Lamballerie,X., Charrel,R.N., Cantaloube,J.F. and De Mico,P.
Title : Direct Submission
Journal : Submitted (29-DEC-1999) Virology, Faculte de Medecine, Bd. Jean Moulin, Marseille 13385 cedex 5, France REMARK Sequence update by submitter
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw