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virusColorado tick fever virus
accAF000720        get sequence
locusAF000720 1884 bp RNA linear VRL 30-DEC-1999
descriptionColorado tick fever virus M5 segment, complete sequence.
versionAF000720.1 GI:2661216
organismColorado tick fever virus
 
feature
  * location : AF000720
  * mol_type : 1..1884
  * strain : Colorado tick fever virus
  * db_xref : genomic RNA
    
similarity between familyBrowse similarity between other speices in the same family.
infected tissuebrain



Targeted by miRanda

(show 100 here)
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Total 114 records predicted by miRanda!    (click miRNAs to view detailed info)

miRNAs in the same tissue showed in boldface
hsa-let-7a hsa-let-7c hsa-miR-1 hsa-miR-106a hsa-miR-106b
hsa-miR-10a hsa-miR-10b hsa-miR-122a hsa-miR-125a hsa-miR-125b
hsa-miR-126 hsa-miR-127 hsa-miR-129 hsa-miR-133a hsa-miR-133b
hsa-miR-134 hsa-miR-145 hsa-miR-147 hsa-miR-153 hsa-miR-15a
hsa-miR-15b hsa-miR-16 hsa-miR-17-5p hsa-miR-184 hsa-miR-187
hsa-miR-188 hsa-miR-18a* hsa-miR-193b hsa-miR-196b hsa-miR-19a
hsa-miR-19b hsa-miR-202 hsa-miR-206 hsa-miR-20a hsa-miR-20b
hsa-miR-21 hsa-miR-212 hsa-miR-214 hsa-miR-217 hsa-miR-24
hsa-miR-28 hsa-miR-296 hsa-miR-301 hsa-miR-302a* hsa-miR-302c
hsa-miR-302c* hsa-miR-30a-3p hsa-miR-30c hsa-miR-323 hsa-miR-324-3p
hsa-miR-324-5p hsa-miR-328 hsa-miR-331 hsa-miR-338 hsa-miR-339
hsa-miR-340 hsa-miR-346 hsa-miR-34a hsa-miR-34c hsa-miR-362
hsa-miR-363* hsa-miR-365 hsa-miR-370 hsa-miR-371 hsa-miR-373
hsa-miR-375 hsa-miR-378 hsa-miR-380-5p hsa-miR-383 hsa-miR-409-5p
hsa-miR-412 hsa-miR-423 hsa-miR-424 hsa-miR-425 hsa-miR-432
hsa-miR-452* hsa-miR-453 hsa-miR-455 hsa-miR-483 hsa-miR-484
hsa-miR-485-5p hsa-miR-486 hsa-miR-489 hsa-miR-490 hsa-miR-491
hsa-miR-492 hsa-miR-493-3p hsa-miR-497 hsa-miR-501 hsa-miR-502
hsa-miR-503 hsa-miR-504 hsa-miR-506 hsa-miR-514 hsa-miR-515-3p
hsa-miR-516-3p hsa-miR-517c hsa-miR-518a-2* hsa-miR-519e hsa-miR-520c
Targeted by TargetScanBrowse



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cds
positiongeneprotein_idnote
XXAAB88255.1one of three different amino acids (arginine, cysteine or tryptophan) is incorporated at amino acid position 338 during read through
reference
1 (bases 1 to 1884)
Author : Attoui,H., De Micco,P. and de Lamballerie,X.
Title : Complete nucleotide sequence of Colorado tick fever virus segments M6, S1 and S2
Journal : J. Gen. Virol. 78 (Pt 11), 2895-2899 (1997) PUBMED 9367376
Comment : X
2 (bases 1 to 1884)
Author : Attoui,H., de Lamballerie,X., Cantaloube,J.F. and De Micco,P.
Title : Direct Submission
Journal : Submitted (22-APR-1997) Virologie, Faculte de Medecine, BD J Moulin, Marseille 13005, France
Comment : X

Department of Biological Science and Technology, Institute of Bioinformatics
National Chiao Tung University,Hsinchu, Taiwan
Contact with: bryan@mail.NCTU.edu.tw