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Predicted HBV wildtype target of known human miRNA      Release 1.0: 2005
Run by miRanda, click to link to other liver virus : HAVHBV HCV HDVHEVHGV
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Browse relationship between conservation and target sites of subtypes.
mfe <=     score >=  
Rank by  score    mfe
  


Here just show
mfe<=-12
The miRNA expression : 5(low) - 12(high).

Total 835 rescords (17 pages)previous   Page 1   next   
rankmiRNAtarget starttarget endmfescorehybridizatoinmiRNA expression
in liver
TargetScan
1hsa-let-7b22982320-16121
uUGGUGUGUU---GGAUGAUGGAGU
||||| ||| || |||:||:|
gACCAC-CAAATGCC-CCTATCTTA
11.726NO
2hsa-miR-114131434-14.1121
aUGUAUGAAG-AAAUGUAAGGu
||:| |||: |||||:| ||
gACGTCCTTTGTTTACGTCCCg
5.340NO
3hsa-miR-100371392-14.9121
GUGUUCAAGCCUAGAUGCC-CAA
|:| :| | | :|||:||| |||
CGCTGGAT-GTGTCTGCGGCGTT
9.137NO
4hsa-miR-105372395-14121
uGUCCU---CAGAC-UCGUAAAcu
| ||| ||||| :||:|||
gCTGGATGTGTCTGCGGCGTTTta
5.000NO
5hsa-miR-106b377395-14.3121
UAGACGUGACAGUCGUGAAAU
|| ||: ||| |:||::||||
ATGTGT-CTG-CGGCGTTTTA
5.784NO
6hsa-miR-10b186210-14.5121
uguuuaAGC-CAA-G-AUGUCCCAu
||| ||| | :|:||||
ccctgcTCGTGTTACAGGCGGGGTt
6.727NO
7hsa-miR-125b18711899-14.1121
AGUGUUC-------AAUCC-CAGAGUCCCU
|| |||| ||:|| | ||: ||||
TC-CAAGCTGTGCCTTGGGTGGCTTTGGGA
10.846NO
8hsa-miR-12614381457-14.3121
CGUAAUAAUGAGUGCCAUGCU
||: |: | |:||| ||||
GCGCTGAATCCCGCGG-ACGA
10.720NO
9hsa-miR-128a20232046-17121
uuuUCUC--UGGCCAAGUGACAcu
|||| |||| ||:|||
cttAGAGTCTCCGGAACATTGTtc
5.472NO
10hsa-miR-128a17071731-14.7121
uuuUCUCUGGC---CAAGUGACACu
| ||||:| |||:|||| |
ttcAAAGACTGTGTGTTTACTGAGt
5.472NO
11hsa-miR-128b20232046-17121
cuuUCUC--UGGCCAAGUGACAcu
|||| |||| ||:|||
cttAGAGTCTCCGGAACATTGTtc
5.226NO
12hsa-miR-128b17071731-14.7121
cuuUCUCUGGC---CAAGUGACACu
| ||||:| |||:|||| |
ttcAAAGACTGTGTGTTTACTGAGt
5.226NO
13hsa-miR-130b22582285-19.1121
uACGGGAAA----GUA-GUAA-CGUGAc
||:||||| ::| ||| |||||
gTGTCCTTTGGAGTGTGGATTCGCACTc
5.095NO
14hsa-miR-15021072133-13.31121
GU-GA-CCAUGUUCC---CAACCCUCU
|| || |||: :| | |||| |||
CACCTGGGTGGGAAGTAATTTGGAAGA
7.336NO
15hsa-miR-18414821502-15.4121
ugggaauaGUCAAGAGGCAGGu
|: ||||||| ||
ctaccgccCGCTTCTCCG-CCt
5.000NO
16hsa-miR-193b25822603-13.1121
uUUCGCCCUGAAAC-UCCCGGucaa
|||| | |||| :|||||
tAAGC---AATTTGTGGGGCCcctt
NONO
17hsa-miR-193b14061436-16121
uuuCGCCCU----GAAAC---UCCCGGUCAa
|||||| ||||| | | || ||
tgcGCGGGACGTCCTTTGTTTACGTCCCGTc
NONO
18hsa-miR-196a23212343-13.9121
gGUUGU--UGUACUUUGAUGgau
||||| | ||||||||
tCAACACTTCCGGAAACTACtgt
NONO
19hsa-miR-202*28352855-12.72121
uUUCUUCAUAUACGUAUCCUuu
|||| || | ||||:|||
cAAGATCTACA-GCATGGGAgg
NONO
20hsa-miR-21029933015-16.5121
agucGGCGA-CAGUGUGCGUGUC
|: || | |: |||||::|
aggaCTACTGGCCGGACGCATGG
6.639NO
21hsa-miR-22411871215-18.5121
auuUGCCUU---GGUGAU---CACUGAAC
||| || |||||: | |:||||
ctgACGCAACCCCCACTGGTTGGGGCTTG
7.182NO
22hsa-miR-24632653-15.7121
gacAAGGACGACUUGACUCGGu
| ||| : |:| ||:|||
aaaTACCTATGGGAGTGGGCCt
11.006NO
23hsa-miR-30122622285-17.7121
cGAAACUGUUAUG-AUAA-CGUGAc
|||||: |:|:: ||| |||||
cCTTTGG-AGTGTGGATTCGCACTc
6.388NO
24hsa-miR-302c504525-14.6121
gGUGACUUUGUACCUUCGUGAAu
||| |:| |||| ||| ||||
gCACGGGACCATGCAAG-ACTTg
NONO
25hsa-miR-30e-3p13851404-13.4121
CGACAUUUGUAGGCUGACUUuc
||||| :| || ||||:|
GCTGT--GCTGCCAACTGGAtc
NONO
26hsa-miR-31448468-14.8121
gucGAUACGGUCGUAGAACGG
|||| :|:|| |||||
ggaCTATCAAGGTATGTTGCC
5.000NO
27hsa-miR-324-5p627650-16.7121
uGUGGUUACGGGAUCCCCU-ACgc
|:| || |||| |||| ||
tCGCAAAATACCTATGGGAGTGgg
NONO
28hsa-miR-324-5p18691893-17.34121
uGUGGUU----ACGGGAUCCCCUACGc
| |||| ||||:| ||| ||
cCTCCAAGCTGTGCCTT--GGGTGGCt
NONO
29hsa-miR-330275303-19.4121
AGAGA-CGUCC-----GGCACACGAAACg
|:||| | :|| |||||||: |||
TTTCTAGGGGGAACACCCGTGTGTCTTGg
NONO
30hsa-miR-33130443067-13.6121
aagauccuauccGGGU-CCCCG--
|||| ||||
ggttcacccctcCCCATGGGGGAC
NONO
31hsa-miR-337629651-15.4121
uuuccguaGUAUAUCCUCGACCu
| |||:||||: ||
gcaaaataCCTATGGGAGTGGGc
NONO
32hsa-miR-33930773096-20.1121
aCUCGAGGACCUCC-UGUCCCu
|||| ||| ||| |||||
gGAGC-CCT-CAGGCTCAGGGc
NONO
33hsa-miR-340880901-13.8121
CCGAUAUUUCAUUGA--CUCUGCCu
|| ||| ||||:| ||| :||
GGATAT---GTAATTGGGAGTTGGg
NONO
34hsa-miR-34630243046-18.9121
UCUCCGUCCGUACGCCC-GUCugu
|| || | |||| |||| |||
AGTGGGA-GCATTCGGGCCAGggt
NONO
35hsa-miR-34617731793-14.5121
ucUCCGUCCGUACGCCCGUCUgu
||| |||| ||: |||| |
ctAGG-AGGC-TGTAGGCATAaa
NONO
36hsa-miR-36216241650-17.72121
UGAGUGUGGAUCC----A-AGGUUCCuaa
|| | ||| ||| | ||||||
ACGCCCAC--AGGAACCTGCCCAAGGtct
NONO
37hsa-miR-37017931814-13121
gguCCAAG-GUGGGGUCGUccg
||| | : | ||||||
attGGTGCGTTCACCAGCAcca
NONO
38hsa-miR-3701944-14.8121
gguccAAG--GUGGGGUC---GUCCg
||| |:||||| ||||
aactcTTCAAGATCCCAGAGTCAGGg
NONO
39hsa-miR-37030713095-18.2121
gguCCAAGGUGGG-GUC---GUCCg
||| :||| ||| ||||
tggGGTGGAGCCCTCAGGCTCAGGg
NONO
40hsa-miR-37112971318-12.9121
uGUGAGUUUUCU--ACCGCCGUg
| | ||: ||: ||| ||||
gCTCGCAGCAGGTCTGG-GGCAa
NONO
41hsa-miR-37129843009-13.7121
UGUGAGU-UUUCU----ACCGCCGUG
|||| || ||:|| |||| | ||
ACACGCACAAGGACTACTGGCCGGAC
NONO
42hsa-miR-380-5p28002822-15.9121
CGCGUA-CAAGAU-ACCAGUUGGU
|||| | ||:|: |||| ||||
GCGCCTCATTTTGCGGGTC-ACCA
NONO
43hsa-miR-383384413-13.8121
uCGGUGU----UAGUGGA---AGAC-UAGa
|| :|: ||||:|| |||| |||
tGCGGCGTTTTATCATCTTCCTCTGCATCc
NONO
44hsa-miR-409-3p281313-19.1121
uCCCCAAGUGG----------CUCGUUGUAAGC
|||| |||| |: ||| |||||
gGGGGAACACCCGTGTGTCTTGGCCAAAATTCG
NONO
45hsa-miR-412187209-16.8121
uGCCGAUCACCUGGUCCACUUCA
| ||| ||| |||| |::||
cCTGCTCGTGTTACAGGCGGGGT
NONO
46hsa-miR-41230043026-16.5121
uGCC-GAUCACCUGGUCCA-CUUCA
||| | |||| |||| |:|||
cCGGACGCATGGA--AGGTGGGAGT
NONO
47hsa-miR-425854871-13.82121
CCGCCUGUGCUGUAAGGGcua
| :||: ||:||||||
GATGGG---GATATTCCCtta
NONO
48hsa-miR-43120522075-14121
acGUACUGCCG---G-ACGUUCugu
||| ||||| | |||||
acCAT-ACGGCAATCAGGCAAGcta
NONO
49hsa-miR-43214471468-16.2121
GGUGGGUUACUGGAUGAGGUUCu
|| | :| |||| |||| :|
CCCGCGGACGACC-CCTCCCGGg
NONO
50hsa-miR-485-5p12621290-13.5121
cuUAAGUA--GUGCC-----GGUCGGAGA
|| ||| ::||| |:|||| ||
cgATCCATACTGCGGAACTCCTAGCCGCT
NONO
let-7b
Target on HBV wildtype 
Binding site 2298-2320
mfe : -16
Hybrid sequence
uUGGUGUGUU---GGAUGAUGGAGU
gACCAC-CAAATGCC-CCTATCTTA miR-1
Target on HBV wildtype 
Binding site 1413-1434
mfe : -14.1
Hybrid sequence
aUGUAUGAAG-AAAUGUAAGGu
gACGTCCTTTGTTTACGTCCCg miR-100
Target on HBV wildtype 
Binding site 371-392
mfe : -14.9
Hybrid sequence
GUGUUCAAGCCUAGAUGCC-CAA
CGCTGGAT-GTGTCTGCGGCGTT miR-105
Target on HBV wildtype 
Binding site 372-395
mfe : -14
Hybrid sequence
uGUCCU---CAGAC-UCGUAAAcu
gCTGGATGTGTCTGCGGCGTTTta miR-106b
Target on HBV wildtype 
Binding site 377-395
mfe : -14.3
Hybrid sequence
UAGACGUGACAGUCGUGAAAU
ATGTGT-CTG-CGGCGTTTTA miR-10b
Target on HBV wildtype 
Binding site 186-210
mfe : -14.5
Hybrid sequence
uguuuaAGC-CAA-G-AUGUCCCAu
ccctgcTCGTGTTACAGGCGGGGTt miR-125b
Target on HBV wildtype 
Binding site 1871-1899
mfe : -14.1
Hybrid sequence
AGUGUUC-------AAUCC-CAGAGUCCCU
TC-CAAGCTGTGCCTTGGGTGGCTTTGGGA miR-126
Target on HBV wildtype 
Binding site 1438-1457
mfe : -14.3
Hybrid sequence
CGUAAUAAUGAGUGCCAUGCU
GCGCTGAATCCCGCGG-ACGA miR-128a
Target on HBV wildtype 
Binding site 2023-2046
mfe : -17
Hybrid sequence
uuuUCUC--UGGCCAAGUGACAcu
cttAGAGTCTCCGGAACATTGTtc miR-128a
Target on HBV wildtype 
Binding site 1707-1731
mfe : -14.7
Hybrid sequence
uuuUCUCUGGC---CAAGUGACACu
ttcAAAGACTGTGTGTTTACTGAGt miR-128b
Target on HBV wildtype 
Binding site 2023-2046
mfe : -17
Hybrid sequence
cuuUCUC--UGGCCAAGUGACAcu
cttAGAGTCTCCGGAACATTGTtc miR-128b
Target on HBV wildtype 
Binding site 1707-1731
mfe : -14.7
Hybrid sequence
cuuUCUCUGGC---CAAGUGACACu
ttcAAAGACTGTGTGTTTACTGAGt miR-130b
Target on HBV wildtype 
Binding site 2258-2285
mfe : -19.1
Hybrid sequence
uACGGGAAA----GUA-GUAA-CGUGAc
gTGTCCTTTGGAGTGTGGATTCGCACTc miR-150
Target on HBV wildtype 
Binding site 2107-2133
mfe : -13.31
Hybrid sequence
GU-GA-CCAUGUUCC---CAACCCUCU
CACCTGGGTGGGAAGTAATTTGGAAGA miR-184
Target on HBV wildtype 
Binding site 1482-1502
mfe : -15.4
Hybrid sequence
ugggaauaGUCAAGAGGCAGGu
ctaccgccCGCTTCTCCG-CCt miR-193b
Target on HBV wildtype 
Binding site 2582-2603
mfe : -13.1
Hybrid sequence
uUUCGCCCUGAAAC-UCCCGGucaa
tAAGC---AATTTGTGGGGCCcctt miR-193b
Target on HBV wildtype 
Binding site 1406-1436
mfe : -16
Hybrid sequence
uuuCGCCCU----GAAAC---UCCCGGUCAa
tgcGCGGGACGTCCTTTGTTTACGTCCCGTc miR-196a
Target on HBV wildtype 
Binding site 2321-2343
mfe : -13.9
Hybrid sequence
gGUUGU--UGUACUUUGAUGgau
tCAACACTTCCGGAAACTACtgt miR-202*
Target on HBV wildtype 
Binding site 2835-2855
mfe : -12.72
Hybrid sequence
uUUCUUCAUAUACGUAUCCUuu
cAAGATCTACA-GCATGGGAgg miR-210
Target on HBV wildtype 
Binding site 2993-3015
mfe : -16.5
Hybrid sequence
agucGGCGA-CAGUGUGCGUGUC
aggaCTACTGGCCGGACGCATGG miR-224
Target on HBV wildtype 
Binding site 1187-1215
mfe : -18.5
Hybrid sequence
auuUGCCUU---GGUGAU---CACUGAAC
ctgACGCAACCCCCACTGGTTGGGGCTTG miR-24
Target on HBV wildtype 
Binding site 632-653
mfe : -15.7
Hybrid sequence
gacAAGGACGACUUGACUCGGu
aaaTACCTATGGGAGTGGGCCt miR-301
Target on HBV wildtype 
Binding site 2262-2285
mfe : -17.7
Hybrid sequence
cGAAACUGUUAUG-AUAA-CGUGAc
cCTTTGG-AGTGTGGATTCGCACTc miR-302c
Target on HBV wildtype 
Binding site 504-525
mfe : -14.6
Hybrid sequence
gGUGACUUUGUACCUUCGUGAAu
gCACGGGACCATGCAAG-ACTTg miR-30e-3p
Target on HBV wildtype 
Binding site 1385-1404
mfe : -13.4
Hybrid sequence
CGACAUUUGUAGGCUGACUUuc
GCTGT--GCTGCCAACTGGAtc miR-31
Target on HBV wildtype 
Binding site 448-468
mfe : -14.8
Hybrid sequence
gucGAUACGGUCGUAGAACGG
ggaCTATCAAGGTATGTTGCC miR-324-5p
Target on HBV wildtype 
Binding site 627-650
mfe : -16.7
Hybrid sequence
uGUGGUUACGGGAUCCCCU-ACgc
tCGCAAAATACCTATGGGAGTGgg miR-324-5p
Target on HBV wildtype 
Binding site 1869-1893
mfe : -17.34
Hybrid sequence
uGUGGUU----ACGGGAUCCCCUACGc
cCTCCAAGCTGTGCCTT--GGGTGGCt miR-330
Target on HBV wildtype 
Binding site 275-303
mfe : -19.4
Hybrid sequence
AGAGA-CGUCC-----GGCACACGAAACg
TTTCTAGGGGGAACACCCGTGTGTCTTGg miR-331
Target on HBV wildtype 
Binding site 3044-3067
mfe : -13.6
Hybrid sequence
aagauccuauccGGGU-CCCCG--
ggttcacccctcCCCATGGGGGAC miR-337
Target on HBV wildtype 
Binding site 629-651
mfe : -15.4
Hybrid sequence
uuuccguaGUAUAUCCUCGACCu
gcaaaataCCTATGGGAGTGGGc miR-339
Target on HBV wildtype 
Binding site 3077-3096
mfe : -20.1
Hybrid sequence
aCUCGAGGACCUCC-UGUCCCu
gGAGC-CCT-CAGGCTCAGGGc miR-340
Target on HBV wildtype 
Binding site 880-901
mfe : -13.8
Hybrid sequence
CCGAUAUUUCAUUGA--CUCUGCCu
GGATAT---GTAATTGGGAGTTGGg miR-346
Target on HBV wildtype 
Binding site 3024-3046
mfe : -18.9
Hybrid sequence
UCUCCGUCCGUACGCCC-GUCugu
AGTGGGA-GCATTCGGGCCAGggt miR-346
Target on HBV wildtype 
Binding site 1773-1793
mfe : -14.5
Hybrid sequence
ucUCCGUCCGUACGCCCGUCUgu
ctAGG-AGGC-TGTAGGCATAaa miR-362
Target on HBV wildtype 
Binding site 1624-1650
mfe : -17.72
Hybrid sequence
UGAGUGUGGAUCC----A-AGGUUCCuaa
ACGCCCAC--AGGAACCTGCCCAAGGtct miR-370
Target on HBV wildtype 
Binding site 1793-1814
mfe : -13
Hybrid sequence
gguCCAAG-GUGGGGUCGUccg
attGGTGCGTTCACCAGCAcca miR-370
Target on HBV wildtype 
Binding site 19-44
mfe : -14.8
Hybrid sequence
gguccAAG--GUGGGGUC---GUCCg
aactcTTCAAGATCCCAGAGTCAGGg miR-370
Target on HBV wildtype 
Binding site 3071-3095
mfe : -18.2
Hybrid sequence
gguCCAAGGUGGG-GUC---GUCCg
tggGGTGGAGCCCTCAGGCTCAGGg miR-371
Target on HBV wildtype 
Binding site 1297-1318
mfe : -12.9
Hybrid sequence
uGUGAGUUUUCU--ACCGCCGUg
gCTCGCAGCAGGTCTGG-GGCAa miR-371
Target on HBV wildtype 
Binding site 2984-3009
mfe : -13.7
Hybrid sequence
UGUGAGU-UUUCU----ACCGCCGUG
ACACGCACAAGGACTACTGGCCGGAC miR-380-5p
Target on HBV wildtype 
Binding site 2800-2822
mfe : -15.9
Hybrid sequence
CGCGUA-CAAGAU-ACCAGUUGGU
GCGCCTCATTTTGCGGGTC-ACCA miR-383
Target on HBV wildtype 
Binding site 384-413
mfe : -13.8
Hybrid sequence
uCGGUGU----UAGUGGA---AGAC-UAGa
tGCGGCGTTTTATCATCTTCCTCTGCATCc miR-409-3p
Target on HBV wildtype 
Binding site 281-313
mfe : -19.1
Hybrid sequence
uCCCCAAGUGG----------CUCGUUGUAAGC
gGGGGAACACCCGTGTGTCTTGGCCAAAATTCG miR-412
Target on HBV wildtype 
Binding site 187-209
mfe : -16.8
Hybrid sequence
uGCCGAUCACCUGGUCCACUUCA
cCTGCTCGTGTTACAGGCGGGGT miR-412
Target on HBV wildtype 
Binding site 3004-3026
mfe : -16.5
Hybrid sequence
uGCC-GAUCACCUGGUCCA-CUUCA
cCGGACGCATGGA--AGGTGGGAGT miR-425
Target on HBV wildtype 
Binding site 854-871
mfe : -13.82
Hybrid sequence
CCGCCUGUGCUGUAAGGGcua
GATGGG---GATATTCCCtta miR-431
Target on HBV wildtype 
Binding site 2052-2075
mfe : -14
Hybrid sequence
acGUACUGCCG---G-ACGUUCugu
acCAT-ACGGCAATCAGGCAAGcta miR-432
Target on HBV wildtype 
Binding site 1447-1468
mfe : -16.2
Hybrid sequence
GGUGGGUUACUGGAUGAGGUUCu
CCCGCGGACGACC-CCTCCCGGg miR-485-5p
Target on HBV wildtype 
Binding site 1262-1290
mfe : -13.5
Hybrid sequence
cuUAAGUA--GUGCC-----GGUCGGAGA
cgATCCATACTGCGGAACTCCTAGCCGCT