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Predicted HAV wildtype target of known human miRNA      Release 1.0: 2005
Run by miRanda, click to link to other liver virus : HAVHBV HCV HDVHEVHGV
mfe <=     score >=  
Rank by  score    mfe
  


Here just show
mfe<=-10
The miRNA expression : 5(low) - 12(high).

Total 1778 rescords (36 pages)previous   Page 1   next   
rankmiRNAtarget starttarget endmfescorehybridizatoinmiRNA expression
in liver
TargetScan
1hsa-miR-100121-19.1128
guGUUCAAGCCUAGAUGCCCaa
|||| ||:||| ||||
ttCAAG-AGGGGTCTCCGGGaa
9.137NO
2hsa-miR-125a120-22.4155
guGUCCAAUUUCCCAGAGUCCCU
|| | |:||||||| ||||
ttCAAG---AGGGGTCTCCGGGA
10.086NO
3hsa-miR-125b120-23.4159
aguGUUCAAUCCCAGAGUCCCU
|||| :||||||| ||||
-ttCAAG-AGGGGTCTCCGGGA
10.846NO
4hsa-miR-296115-12.6129
uguccuAACUCCCCCCCGGga
|| | | ||||:|
------TTCAAGAGGGGTCtc
7.400NO
5hsa-miR-99a121-21.9135
guGUUCUAGCCUAGAUGCCCaa
||||| ||:||| ||||
ttCAAGA-GGGGTCTCCGGGaa
9.146NO
6hsa-miR-99b121-15.8127
gcGUUC-CAGCCAAGAUGCCCac
|||| | || ||| ||||
ttCAAGAG--GGGTCTCCGGGaa
7.475NO
7hsa-miR-542-5p118-15.2124
gagcacuGUACU-ACUAGGGGCu
|| || |:||:|||
-----ttCAAGAGGGGTCTCCGg
NONO
8hsa-miR-518c*331-21.1143
GUCUUUCACGAAGG------GAGGUCUCu
|| :|:| |: ||| :|||:|||
CAAGAGGGGTCTCCGGGAATTTCCGGAGt
NONO
9hsa-miR-191730-17.4121
UCGACGAAAACCCU--AAGGCaac
|| |: | |||| |||||
AGGGGTCTCCGGGAATTTCCGgag
NONO
10hsa-miR-510732-16.9132
aCACUAACGG---UGAGAGGACUCAu
| |:| || | |:||| ||||
aGGGGTCTCCGGGAATTTCCGGAGTc
NONO
11hsa-miR-425829-15.5123
CCGCCUGUG--CUGUAAGGGCua
|| || | | |: |||:|||
GG-GGTCTCCGGGAATTTCCGga
NONO
12hsa-miR-3261331-17122
GACCUCCUUCCCGGGUCUCc
|| :|||| :||:|||
CTCCGGGAA-TTTCCGGAGt
NONO
13hsa-miR-520a*1742-14.6129
uCUUUCAUG----AAGGGAG-ACCUc
|:|| | | |||||| ||||
gGGAATTTCCGGAGTCCCTCTTGGAa
NONO
14hsa-miR-5251742-15.6132
uCUUUCA----CGUAGGGAG-ACCUc
|:|| | | :|||||| ||||
gGGAATTTCCGGAGTCCCTCTTGGAa
NONO
15hsa-miR-422a1848-14.1149
CCGGAA--GACU--GGGA-----UUCAGGUc
|| || | || |||| |||||||
GGAATTTCCGGAGTCCCTCTTGGAAGTCCAt
NOYes
16hsa-miR-519e*1844-14.2121
CUUUCACG-----AGGGAAAACCUcuu
|:|| | | ||||| |||||
GGAATTTCCGGAGTCCCTCTTGGAagt
NONO
17hsa-miR-4122556-18.9150
uGCC-----GAUCACCU---GGU-CCACUUCa
||| || |||| ||| |||||:|
cCGGAGTCCCTCTTGGAAGTCCATGGTGAGGg
NONO
18hsa-miR-422b3048-13.3148
CCGGAAGACUGAGGUUCAGGUc
| || ||| | |||||||
GTCCCTCT---TGGAAGTCCAt
NOYes
19hsa-miR-1883160-20.1125
uGGGAGG----U--GGUAC--GUUCCCUac
|||||: | ||||| |:||||
tCCCTCTTGGAAGTCCATGGTGAGGGGAct
5.000NO
20hsa-miR-2243462-16.7124
auuugCCUU--GGUG--A--UCACUGAAC
|||| |||: | :| ||||||
ctcttGGAAGTCCATGGTGAGGGGACTTG
7.182NO
21hsa-miR-3313452-12.3121
aAGAUCCUAUCCGGGUCCCcg
||| ||| | |:||| ||
cTCTTGGA-A-GTCCATGGtg
NONO
22hsa-miR-2113659-15.9125
uccgCUUC--CUACUGUUUCCCUu
|||| |||:::|:||||
cttgGAAGTCCATGGTGAGGGGAc
5.593NO
23hsa-miR-2024070-15.2141
aaaagGGUAC---------GGGAUAUGGAGa
||||| |:: |||||||
gaagtCCATGGTGAGGGGACTTGATACCTCa
NOYes
24hsa-miR-2964161-13.1122
uguccuaACUCCCCCCCGGGA
||: | |||| |:|
aagtccaTGGTGAGGGGACTT
7.400NO
25hsa-miR-4914272-20.8124
aggaGUAC--CUUCCC------AAGGGGUGa
|||| ||:||| | ||:|||
agtcCATGGTGAGGGGACTTGATACCTCACc
NONO
26hsa-miR-133a4362-17.7132
ugucgACCAACUUCCCCUGguu
|||| :|||||||
gtccaTGGT--GAGGGGACttg
5.000NO
27hsa-miR-133b4462-17.7132
aucgACCAACUUCCCCUGguu
|||| :|||||||
tccaTGGT--GAGGGGACttg
NONO
28hsa-let-7a4970-14.2126
uugauauguUGGAUGAUGGAGU
||:|: |||||||
ggtgaggggACTTGATACCTCA
11.678NO
29hsa-let-7b4970-14.8126
uugguguguUGGAUGAUGGAGU
||:|: |||||||
ggtgaggggACTTGATACCTCA
11.726NO
30hsa-let-7c4970-14.2126
uugguauguUGGAUGAUGGAGU
||:|: |||||||
ggtgaggggACTTGATACCTCA
11.774NO
31hsa-let-7f4970-10.4124
uugauauguuagaugAUGGAGU
|||||||
ggtgaggggacttgaTACCTCA
10.092NO
32hsa-miR-984970-15130
uuguuauguUGAAUGAUGGAGU
||||: |||||||
ggtgaggggACTTGATACCTCA
6.856NO
33hsa-let-7d5070-13.7126
ugaUACGUUGGAUGAUGGAGa
| | :||:|: ||||||
gtgAGGGGACTTGATACCTCa
7.888NO
34hsa-let-7e5070-13.5124
ugauauguuggaggAUGGAGU
|||||||
gtgaggggacttgaTACCTCA
6.037NO
35hsa-let-7g5070-13.8124
ugacauguuugaugAUGGAGU
|||||||
gtgaggggacttgaTACCTCA
9.988NO
36hsa-let-7i5070-12.6124
ugucguguuugaugAUGGAGU
|||||||
gtgaggggacttgaTACCTCA
7.883NO
37hsa-miR-191*5477-16123
CCCCUG--CUUUAGGUUCGCGUCg
|||||| || | |: | ||| |
GGGGACTTGATACCTCACCGCCGt
NONO
38hsa-miR-4495876-10.1131
UGGUCGAUUGUUAUGUGACGGu
||: | || | | ||| |||
ACTTGATACC--T-CACCGCCg
NONO
39hsa-miR-124a6286-15.52130
accguaAGUGGC-GC--ACGGAauu
|||||| || |||||
gataccTCACCGCCGTTTGCCTagg
5.000NO
40hsa-miR-216896-11.1126
AGUUGUAGUCAGAC--------UAUUCGAU
||| |: | ||:|| |||:||||
TCACCG-CCGTTTGCCTAGGCTATAGGCTA
10.156NO
41hsa-miR-524*116137-13.2132
cucuuucacgAAGGGAAACAuc
||||||||||
ccctttcctaTTCCCTTTGTtt
NONO
42hsa-miR-498120146-13.32127
cuuuuUGCGGGGGAC----CGAACUUU
|: |||::|| ||||| ||
ttcctATTCCCTTTGTTTTGCTTGTAA
NONO
43hsa-miR-214137163-11.99132
gACGGACA-----GA-CACGGACGACa
|||:||| :| | ||||| |
tTGCTTGTAAATATTAATTCCTGCAGg
8.407NO
44hsa-miR-492143167-19.1154
uucUUAGAA--CAGGGCGUCCAGGa
||| || |||:||||||:|
gtaAATATTAATTCCTGCAGGTTCa
NONO
45hsa-miR-370144164-14.2135
gguccaAGGUGGGGUCGUCCg
|: |::|| |||||
taaataTTAATTCCTGCAGGt
NONO
46hsa-miR-490145166-13.4132
gUCGUACCUCAGGAGGUCCAAc
| :|| | |||| ||||||
aAATATTAATTCCTGCAGGTTc
NONO
47hsa-miR-10a148172-10.5134
gUGUUUAAG--CCUAGAUGUCCCAu
|: ||||| | | | ||||||
tATTAATTCCTGCAGGTTCAGGGTt
7.071NO
48hsa-miR-10b149172-12.1137
UGUUUAAG-----CCAAGAUGUCCCAu
|: ||||| |||| ||||||
ATTAATTCCTGCAGGTT---CAGGGTt
6.727NO
49hsa-miR-500149168-10.52129
gucUUAGGAACGGGUCCACGUa
|||:| || ||||| ||
attAATTCCTG--CAGGTTCAg
NONO
50hsa-miR-339150171-22127
ACUCGAGGACCUCC-UGUCCCu
| | :||||| ||| |||||
TTAATTCCTGCAGGTTCAGGGt
NONO
miR-100
Target on HAV 
Binding site 1-21
mfe : -19.1
Hybrid sequence
guGUUCAAGCCUAGAUGCCCaa
ttCAAG-AGGGGTCTCCGGGaa miR-125a
Target on HAV 
Binding site 1-20
mfe : -22.4
Hybrid sequence
guGUCCAAUUUCCCAGAGUCCCU
ttCAAG---AGGGGTCTCCGGGA miR-125b
Target on HAV 
Binding site 1-20
mfe : -23.4
Hybrid sequence
aguGUUCAAUCCCAGAGUCCCU
-ttCAAG-AGGGGTCTCCGGGA miR-296
Target on HAV 
Binding site 1-15
mfe : -12.6
Hybrid sequence
uguccuAACUCCCCCCCGGga
------TTCAAGAGGGGTCtc miR-99a
Target on HAV 
Binding site 1-21
mfe : -21.9
Hybrid sequence
guGUUCUAGCCUAGAUGCCCaa
ttCAAGA-GGGGTCTCCGGGaa miR-99b
Target on HAV 
Binding site 1-21
mfe : -15.8
Hybrid sequence
gcGUUC-CAGCCAAGAUGCCCac
ttCAAGAG--GGGTCTCCGGGaa miR-542-5p
Target on HAV 
Binding site 1-18
mfe : -15.2
Hybrid sequence
gagcacuGUACU-ACUAGGGGCu
-----ttCAAGAGGGGTCTCCGg miR-518c*
Target on HAV 
Binding site 3-31
mfe : -21.1
Hybrid sequence
GUCUUUCACGAAGG------GAGGUCUCu
CAAGAGGGGTCTCCGGGAATTTCCGGAGt miR-191
Target on HAV 
Binding site 7-30
mfe : -17.4
Hybrid sequence
UCGACGAAAACCCU--AAGGCaac
AGGGGTCTCCGGGAATTTCCGgag miR-510
Target on HAV 
Binding site 7-32
mfe : -16.9
Hybrid sequence
aCACUAACGG---UGAGAGGACUCAu
aGGGGTCTCCGGGAATTTCCGGAGTc miR-425
Target on HAV 
Binding site 8-29
mfe : -15.5
Hybrid sequence
CCGCCUGUG--CUGUAAGGGCua
GG-GGTCTCCGGGAATTTCCGga miR-326
Target on HAV 
Binding site 13-31
mfe : -17
Hybrid sequence
GACCUCCUUCCCGGGUCUCc
CTCCGGGAA-TTTCCGGAGt miR-520a*
Target on HAV 
Binding site 17-42
mfe : -14.6
Hybrid sequence
uCUUUCAUG----AAGGGAG-ACCUc
gGGAATTTCCGGAGTCCCTCTTGGAa miR-525
Target on HAV 
Binding site 17-42
mfe : -15.6
Hybrid sequence
uCUUUCA----CGUAGGGAG-ACCUc
gGGAATTTCCGGAGTCCCTCTTGGAa miR-422a
Target on HAV 
Binding site 18-48
mfe : -14.1
Hybrid sequence
CCGGAA--GACU--GGGA-----UUCAGGUc
GGAATTTCCGGAGTCCCTCTTGGAAGTCCAt miR-519e*
Target on HAV 
Binding site 18-44
mfe : -14.2
Hybrid sequence
CUUUCACG-----AGGGAAAACCUcuu
GGAATTTCCGGAGTCCCTCTTGGAagt miR-412
Target on HAV 
Binding site 25-56
mfe : -18.9
Hybrid sequence
uGCC-----GAUCACCU---GGU-CCACUUCa
cCGGAGTCCCTCTTGGAAGTCCATGGTGAGGg miR-422b
Target on HAV 
Binding site 30-48
mfe : -13.3
Hybrid sequence
CCGGAAGACUGAGGUUCAGGUc
GTCCCTCT---TGGAAGTCCAt miR-188
Target on HAV 
Binding site 31-60
mfe : -20.1
Hybrid sequence
uGGGAGG----U--GGUAC--GUUCCCUac
tCCCTCTTGGAAGTCCATGGTGAGGGGAct miR-224
Target on HAV 
Binding site 34-62
mfe : -16.7
Hybrid sequence
auuugCCUU--GGUG--A--UCACUGAAC
ctcttGGAAGTCCATGGTGAGGGGACTTG miR-331
Target on HAV 
Binding site 34-52
mfe : -12.3
Hybrid sequence
aAGAUCCUAUCCGGGUCCCcg
cTCTTGGA-A-GTCCATGGtg miR-211
Target on HAV 
Binding site 36-59
mfe : -15.9
Hybrid sequence
uccgCUUC--CUACUGUUUCCCUu
cttgGAAGTCCATGGTGAGGGGAc miR-202
Target on HAV 
Binding site 40-70
mfe : -15.2
Hybrid sequence
aaaagGGUAC---------GGGAUAUGGAGa
gaagtCCATGGTGAGGGGACTTGATACCTCa miR-296
Target on HAV 
Binding site 41-61
mfe : -13.1
Hybrid sequence
uguccuaACUCCCCCCCGGGA
aagtccaTGGTGAGGGGACTT miR-491
Target on HAV 
Binding site 42-72
mfe : -20.8
Hybrid sequence
aggaGUAC--CUUCCC------AAGGGGUGa
agtcCATGGTGAGGGGACTTGATACCTCACc miR-133a
Target on HAV 
Binding site 43-62
mfe : -17.7
Hybrid sequence
ugucgACCAACUUCCCCUGguu
gtccaTGGT--GAGGGGACttg miR-133b
Target on HAV 
Binding site 44-62
mfe : -17.7
Hybrid sequence
aucgACCAACUUCCCCUGguu
tccaTGGT--GAGGGGACttg let-7a
Target on HAV 
Binding site 49-70
mfe : -14.2
Hybrid sequence
uugauauguUGGAUGAUGGAGU
ggtgaggggACTTGATACCTCA let-7b
Target on HAV 
Binding site 49-70
mfe : -14.8
Hybrid sequence
uugguguguUGGAUGAUGGAGU
ggtgaggggACTTGATACCTCA let-7c
Target on HAV 
Binding site 49-70
mfe : -14.2
Hybrid sequence
uugguauguUGGAUGAUGGAGU
ggtgaggggACTTGATACCTCA let-7f
Target on HAV 
Binding site 49-70
mfe : -10.4
Hybrid sequence
uugauauguuagaugAUGGAGU
ggtgaggggacttgaTACCTCA miR-98
Target on HAV 
Binding site 49-70
mfe : -15
Hybrid sequence
uuguuauguUGAAUGAUGGAGU
ggtgaggggACTTGATACCTCA let-7d
Target on HAV 
Binding site 50-70
mfe : -13.7
Hybrid sequence
ugaUACGUUGGAUGAUGGAGa
gtgAGGGGACTTGATACCTCa let-7e
Target on HAV 
Binding site 50-70
mfe : -13.5
Hybrid sequence
ugauauguuggaggAUGGAGU
gtgaggggacttgaTACCTCA let-7g
Target on HAV 
Binding site 50-70
mfe : -13.8
Hybrid sequence
ugacauguuugaugAUGGAGU
gtgaggggacttgaTACCTCA let-7i
Target on HAV 
Binding site 50-70
mfe : -12.6
Hybrid sequence
ugucguguuugaugAUGGAGU
gtgaggggacttgaTACCTCA miR-191*
Target on HAV 
Binding site 54-77
mfe : -16
Hybrid sequence
CCCCUG--CUUUAGGUUCGCGUCg
GGGGACTTGATACCTCACCGCCGt miR-449
Target on HAV 
Binding site 58-76
mfe : -10.1
Hybrid sequence
UGGUCGAUUGUUAUGUGACGGu
ACTTGATACC--T-CACCGCCg miR-124a
Target on HAV 
Binding site 62-86
mfe : -15.52
Hybrid sequence
accguaAGUGGC-GC--ACGGAauu
gataccTCACCGCCGTTTGCCTagg miR-21
Target on HAV 
Binding site 68-96
mfe : -11.1
Hybrid sequence
AGUUGUAGUCAGAC--------UAUUCGAU
TCACCG-CCGTTTGCCTAGGCTATAGGCTA miR-524*
Target on HAV 
Binding site 116-137
mfe : -13.2
Hybrid sequence
cucuuucacgAAGGGAAACAuc
ccctttcctaTTCCCTTTGTtt miR-498
Target on HAV 
Binding site 120-146
mfe : -13.32
Hybrid sequence
cuuuuUGCGGGGGAC----CGAACUUU
ttcctATTCCCTTTGTTTTGCTTGTAA miR-214
Target on HAV 
Binding site 137-163
mfe : -11.99
Hybrid sequence
gACGGACA-----GA-CACGGACGACa
tTGCTTGTAAATATTAATTCCTGCAGg miR-492
Target on HAV 
Binding site 143-167
mfe : -19.1
Hybrid sequence
uucUUAGAA--CAGGGCGUCCAGGa
gtaAATATTAATTCCTGCAGGTTCa miR-370
Target on HAV 
Binding site 144-164
mfe : -14.2
Hybrid sequence
gguccaAGGUGGGGUCGUCCg
taaataTTAATTCCTGCAGGt miR-490
Target on HAV 
Binding site 145-166
mfe : -13.4
Hybrid sequence
gUCGUACCUCAGGAGGUCCAAc
aAATATTAATTCCTGCAGGTTc miR-10a
Target on HAV 
Binding site 148-172
mfe : -10.5
Hybrid sequence
gUGUUUAAG--CCUAGAUGUCCCAu
tATTAATTCCTGCAGGTTCAGGGTt miR-10b
Target on HAV 
Binding site 149-172
mfe : -12.1
Hybrid sequence
UGUUUAAG-----CCAAGAUGUCCCAu
ATTAATTCCTGCAGGTT---CAGGGTt miR-500
Target on HAV 
Binding site 149-168
mfe : -10.52
Hybrid sequence
gucUUAGGAACGGGUCCACGUa
attAATTCCTG--CAGGTTCAg miR-339
Target on HAV 
Binding site 150-171
mfe : -22
Hybrid sequence
ACUCGAGGACCUCC-UGUCCCu
TTAATTCCTGCAGGTTCAGGGt